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Number of items: 56.

Conference contribution

Graham, JE, Moore, Johnny, Jiru, X, Goodall, E, Dooley, James, Dartt, D, Downes, Stephen and Moore, Tara (2007) Pathogen or commensal: a pcr based study of ocular surface bacterial flora in normal and dry eyes. In: ) 5th International Conference, tear film & ocular surface: basic science and clinical relevance, TFOS, Sicily. Acta Ophthalmologica Scandinavica. Vol 85 (Suppl 240 ) 1 pp. [Conference contribution]

McGilligan, Victoria, graham, JE, Moore, Johnny, McMullan, Geoffrey, Graham, RLJ, Beirne, Raymond, Downes, Stephen and Moore, Tara (2007) Proteomic analysis of conjucntival swab by mass spectrometry. In: International Tear Film and Ocular Surface Conference , Sciliy. International Conference, tear film & ocular surface: basic science and clinical relevance. Vol 85 (Suppl 240) 1 pp. [Conference contribution]

McGilligan, Victoria, Graham, JE, Moore, Johnny, McMullan, Geoffrey, Graham, RLJ, Beirne, Raymond, Downes, Stephen and Moore, Tara (2007) Proteomic analysis of conjucntival swab by mass spectrometry. In: EVER, Slovenia. Acta Ophthalmologica Scandinavica. Vol 85 (Suppl 240) 1 pp. [Conference contribution]

Moore, Johnny, Graham, JE, Goodall, E, Darrtt, D, Leccisotti, A, Downes, Stephen and Moore, Tara (2007) Correlation between diagnostic tests guides the development and use of a dry eye diagnostic algorithm. In: 5th International Conference, tear film & ocular surface: basic science and clinical relevance, Sciliy. Acta Ophthalmologica Scandinavica. Vol 85 (Suppl 240) 1 pp. [Conference contribution]

Graham, JE, Moore, Johnny, Dartt, DA, Best, R, Alarbi, M, McGimpsey, S, Diebold, Y, Downes, Stephen and Moore, Tara (2006) Ocular Surface Bacterial Flora - A Conundrum. In: European Association for Vision and Eye Research (EVER) International Conference, Portugal. Acta Ophthalmologica Scandinavica . Vol 84 (Suppl 239) 1 pp. [Conference contribution]

Graham, JE, Moore, Johnny, Dartt, DA, Best, R, Alarbi, M, McGimpsey, S, Diebold, Y, Downes, Stephen and Moore, Tara (2006) Staphylococcus epidermidis: Friend or Foe in Dry Eye, its Interaction with Conjunctival Goblet Cells. In: European Association for Vision and Eye Research (EVER) International Conference, Portugal. Acta Ophthalmologica Scandinavica . Vol 84 (Suppl 239) 1 pp. [Conference contribution]

Berrar, Daniel, Sturgeon, B, Bradbury, I, Downes, Stephen and Dubitzky, Werner (2005) Integration of microarray data for a comparative study of classifiers and identification of marker genes. In: METHODS OF MICROARRAY DATA ANALYSIS IV, Durham, NC. UNSPECIFIED. 386 pp. [Conference contribution]

Moore, Johnny, Small, DM, Graham, JE, Atkinson, Sarah, Meenan, BJ, Lui, C, Downes, Stephen and Moore, Tara (2004) The effect of atmospheric plasma surface treatment of poly (methyl methacrylate) PMMA on corneal epithelial cell growth, protein absorption and cytokine expression. In: European Association for Vision & Eye Research, Vilamoura, Portugal. Journal for Research in Experimental and Clinical Ophthalmology. Vol 36 (S1) 1 pp. [Conference contribution]

Moore, Johnny, Small, DM, Graham, JE, Atkinson, Sarah, Meenan, BJ, Lui, C, Downes, Stephen and Moore, Tara (2004) The effect of atmospheric plasma surface treatment of poly(methyl methacrylate) PMMA on corneal epithelial cell growth and protein absorption. In: UK Society for Biomaterials, University of Brighton. Ophthalmic Research. Vol 36 (S1) 1 pp. [Conference contribution]

Journal article

Barnes, Clifford, McKerr, George, Soto, A. M., Downes, Stephen and Howard, Vyvyan (2014) From Single Cells to Tissues: Interactions between the Matrix and Human Breast Cells in Real Time. PLOS ONE, 9 (4). pp. 1-12. [Journal article]

McGlynn, Angela P, Wasson, Gillian R, O'Reilly, Sharleen R, McNulty, Helene, Downes, C. Stephen, Chang, Chin-Kuo, Hoey, Leane, Molloy, Anne M, Ward, Mary, Strain, JJ, McKerr, George, Weir, Donald G and Scott, John M (2013) Low Colonocyte Folate Is Associated with Uracil Misincorporation and Global DNA Hypomethylation in Human Colorectum. Journal of Nutrition, 143 . [Journal article]

Moore, Johnny, Atkinson, Sarah, Azar, Dimitri T, Worthington, Jenny, Downes, Stephen, Courtney, David G and Moore, Tara (2013) Protection of corneal epithelial stem cells prevents UV-A damage during corneal collagen cross-linking treatment for keratoconus. Br J Ophthalmol , 16 . [Journal article]

Volkert, Michael R., Mórocz, Mónika, Gali, Himabindu, Raskó, István, Downes, Stephen and Haracska, Lajos (2013) Single Cell Analysis of Human RAD18-Dependent DNA Post-Replication Repair by Alkaline Bromodeoxyuridine Comet Assay. PLoS ONE, 8 (8). e70391. [Journal article]

McKenna, Declan J, Doherty, Bernadette, Downes, Stephen, McKeown, SR and McKelvey-Martin, Valerie J (2012) Use of the Comet-FISH Assay to Compare DNA Damage and Repair in p53 and hTERT Genes following Ionizing Radiation. PLoS ONE, 7 (11). e49364. [Journal article]

Nagy, Dóra, Tömöry, Gyöngyvér, Csányi, Bernadett, Bogácsi-Szabó, Erika, Czibula, Ágnes, Priskin, Katalin, Bede, Olga, Bartosiewicz, László, Downes, Stephen and Raskó, István (2011) Comparison of lactase persistence polymorphism in ancient and present-day Hungarian populations. American Journal of Physical Anthropology, 145 (2). p. 262. [Journal article]

McArt, DG, McKerr, George, Saetzler, Kurt, Howard, Vyvyan, Downes, Stephen and Wasson, GR (2010) Comet sensitivity in assessing DNA damage and repair in different cell cycle stages. Mutagenesis, 25 (3). p. 299. [Journal article]

McDaid, J. R., Loughery, J., Dunne, P., Boyer, J. C., Downes, Stephen, Farber, R. A. and Walsh, Colum (2010) MLH1 mediates PARP-dependent cell death in response to the methylating agent N-methyl-N-nitrosourea (vol 101, pg 441, 2009). BRITISH JOURNAL OF CANCER, 102 (6). p. 1080. [Journal article]

Priskin, K, Szabó, K, Tömöry, G, Bogácsi-Szabó, E, Csányi, B, Eördögh, R, Downes, Stephen and Raskó, I (2010) Mitochondrial sequence variation in ancient horses from the Carpathian Basin and possible modern relatives. Genetica, 138 . pp. 211-218. [Journal article]

Sunnotel, Olaf, Walsh, Colum, Downes, Stephen and Lagan, Kevin (2010) Alterations in the steroid hormone receptor co-chaperone FKBPL are associated with male infertility: a case-control study. Reproductive Bioliogy and Endocrinology, 8 (22). [Journal article]

McDaid, J. R., Loughery, J., Dunne, P., Boyer, J. C., Downes, Stephen, Farber, R. A. and Walsh, Colum (2009) MLH1 mediates PARP-dependent cell death in response to the methylating agent N-methyl-N-nitrosourea. BRITISH JOURNAL OF CANCER, 101 (3). pp. 441-451. [Journal article]

Csanyi, B., Bogacsi-Szabo, E., Tomory, Gy., Czibula, A., Priskin, K., Csosz, A., Mende, B., Lango, P., Csete, K., Zsolnai, A., Conant, E. K., Downes, Stephen and Rasko, I. (2008) Y-chromosome analysis of ancient Hungarian and two modern Hungarian-speaking populations from the Carpathian Basin. ANNALS OF HUMAN GENETICS, 72 (Part 4). pp. 519-534. [Journal article]

Fuss, Hendrik, Dubitzky, Werner, Downes, Stephen and Kurth, Mary Jo (2008) Src family kinases and receptors: Analysis of three activation mechanisms by dynamic systems modeling. BIOPHYSICAL JOURNAL, 94 (6). pp. 1995-2006. [Journal article]

Graham, JE, Graham, RLJ, Beirne, Raymond, McGilligan, Victoria, Downes, Stephen, Moore, Johnny, Moore, Tara and McMullan, Geoffrey (2008) The Use of Conjunctival Swab for the Proteomic Characterisation of Dry Eye Syndrome. Journal of Proteomics and Bioinformatics, 1 . pp. 20-33. [Journal article]

Wasson, Gillian R, McKelvey-Martin, Valerie and Downes, Stephen (2008) The use of the comet assay in the study of human nutrition and cancer. MUTAGENESIS, 23 (3). pp. 153-162. [Journal article]

Fuss, Hendrik, Dubitzky, Werner, Downes, Stephen and Kurth, Mary Jo (2007) Deactivation of src family kinases: Hypothesis testing using a Monte Carlo sensitivity analysis of systems-level properties. JOURNAL OF COMPUTATIONAL BIOLOGY, 14 (9). pp. 1185-1200. [Journal article]

Graham, Joanna E., Moore, Johnny, Jiru, Xu, Moore, John E., Goodall, Edward A., Dooley, James S. G., Hayes, Velma, Dartt, Darlene A., Downes, Stephen and Moore, Tara (2007) Ocular pathogen or commensal: A PCR-based study of surface bacterial flora in normal and dry eyes. INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 48 (12). pp. 5616-5623. [Journal article]

Sanderson, Peter, Stone, Elaine, Kim, Young-In, Mathers, John C., Kampman, Ellen, Downes, Stephen, Muir, Kenneth R. and Baron, John A. (2007) Folate and colo-rectal cancer risk. BRITISH JOURNAL OF NUTRITION, 98 (6). pp. 1299-1304. [Journal article]

Tomory, Gyoengyver, Csanyi, Bernadett, Bogacsi-Szabo, Erika, Kalmar, Tibor, Czibula, Agnes, Csosz, Aranka, Priskin, Katalin, Mende, Balazs, Lango, Peter, Downes, Stephen and Rasko, Istvan (2007) Comparison of maternal lineage and biogeographic analyses of ancient and modern Hungarian populations. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY, 134 (3). pp. 354-368. [Journal article]

Fuss, Hendrik, Dubitzky, Werner, Downes, Stephen and Kurth, Mary Jo (2006) Bistable switching and excitable behaviour in the activation of Src at mitosis. BIOINFORMATICS, 22 (14). E158-E165. [Journal article]

Gilbert, David, Fuss, Hendrik, Gu, Xu, Orton, Richard, Robinson, Steve, Vyshemirsky, Vladislav, Kurth, Mary Jo, Downes, Stephen and Dubitzky, Werner (2006) Computational methodologies for modelling, analysis and simulation of signalling networks. BRIEFINGS IN BIOINFORMATICS, 7 (4). pp. 339-353. [Journal article]

Wasson, Gillian R, McGlynn, Angela P, McNulty, Helene, O'Reilly, Sharleen L, McKelvey-Martin, Valerie, McKerr, George, Strain, JJ, Scott, John and Downes, Stephen (2006) Global DNA and p53 region-specific hypomethylation in human colonic cells is induced by folate depletion and reversed by folate supplementation. JOURNAL OF NUTRITION, 136 (11). pp. 2748-2753. [Journal article]

Berrar, D, Sturgeon, B, Bradbury, I, Downes, Stephen and Dubitzky, Werner (2005) Survival trees for analyzing clinical outcome in lung adenocarcinomas based on gene expression profiles: Identification of neogenin and diacylglycerol kinase alpha expression as critical factors. JOURNAL OF COMPUTATIONAL BIOLOGY, 12 (5). pp. 534-544. [Journal article]

Bogacsi-Szabo, E, Kalmar, T, Csanyi, B, Tomory, G, Czibula, A, Priskin, K, Horvath, F, Downes, Stephen and Rasko, I (2005) Mitochondrial DNA of ancient Cumanians: Culturally Asian steppe nomadic immigrants with substantially more western Eurasian mitochondrial DNA lineages. HUMAN BIOLOGY, 77 (5). pp. 639-662. [Journal article]

Fuss, H, Dubitzky, Werner, Downes, Stephen and Kurth, MJ (2005) Mathematical models of cell cycle regulation. BRIEFINGS IN BIOINFORMATICS, 6 (2). pp. 163-177. [Journal article]

Bonham, M, O'Connor, JM, Alexander, HD, Coulter, J, Walsh, PM, McAnena, LB, Downes, Stephen, Hannigan, BM and Strain, JJ (2003) Zinc supplementation has no effect on circulating levels of peripheral blood leucocytes and lymphocyte subsets in healthy adult men. BRITISH JOURNAL OF NUTRITION, 89 (5). pp. 695-703. [Journal article]

Bonham, M, O'Connor, JM, McAnena, Liadhan, Walsh, PM, Downes, Stephen, Hannigan, BM and Strain, JJ (2003) Zinc supplementation has no effect on lipoprotein metabolism, hemostasis, and putative indices of copper status in healthy men. BIOLOGICAL TRACE ELEMENT RESEARCH, 93 (1-3). pp. 75-86. [Journal article]

Bonham, Maxine P, O'Connor, Jacqueline, McAnena, Liadhan, Walsh, PM, Downes, Stephen, Hannigan, BM and Strain, JJ (2003) Zinc supplementation has no effect on lipoprotein metabolism, hemostasis, and putative indices of copper status in healthy men. Biological Trace Element Research, 93 (1-3). pp. 75-86. [Journal article]

Bonham, Maxine P, O'Connor, JM, Alexander, HD, Coulter, J, Walsh, PM, McAnena, LB, Downes, Stephen, Hannigan, BM and Strain, JJ (2003) Zinc supplementation has no effect on circulating levels of peripheral blood leucocytes and lymphocyte subsets in healthy adult men. BRITISH JOURNAL OF NUTRITION, 89 (5). pp. 695-703. [Journal article]

Doherty, SC, McKeown, Stephanie, McKelvey-Martin, Valerie, Downes, Stephen, Atala, A, Yoo, JJ, Simpson, DA and Kaufmann, WK (2003) Cell cycle checkpoint function in bladder cancer. JOURNAL OF THE NATIONAL CANCER INSTITUTE, 95 (24). pp. 1859-1868. [Journal article]

McGlynn, AP, Wasson, GR, O'Reilly, S, McKelvey-Martin, Valerie, McNulty, Helene, Strain, JJ, McKerr, George, Mullan, F, Mahmud, N, Scott, J, Weir, DG and Downes, Stephen (2003) Detection of replicative integrity in small colonic biopsies using the BrdUrd comet assay. BRITISH JOURNAL OF CANCER, 88 (6). pp. 895-901. [Journal article]

McKenna, DJ, Gallus, M, McKeown, Stephanie, Downes, Stephen and McKelvey-Martin, Valerie (2003) Modification of the alkaline Comet assay to allow simultaneous evaluation of mitomycin C-induced DNA cross-link damage and repair of specific DNA sequences in RT4 cells. DNA REPAIR, 2 (8). pp. 879-890. [Journal article]

Morocz, M, Csiszar, A, Johnson, RT, Downes, Stephen, Cserpan, I and Rasko, I (2003) Variation in sequence-specific repair of UV damage in human pericentromeric heterochromatin of different cell lines. CANCER LETTERS, 193 (2). pp. 189-197. [Journal article]

Deming, PB, Flores, KG, Downes, Stephen, Paules, RS and Kaufmann, WK (2002) ATR enforces the topoisomerase II-dependent G(2) checkpoint through inhibition of Plk1 kinase. JOURNAL OF BIOLOGICAL CHEMISTRY, 277 (39). pp. 36832-36838. [Journal article]

Kaufmann, WK, Campbell, CB, Simpson, DA, Deming, PB, Filatov, L, Galloway, DA, Zhao, XJ, Creighton, AM and Downes, Stephen (2002) Degradation of ATM-independent checkpoint function in human cells is secondary to inactivation of p53 and correlated with chromosome destabilization. Cell Cycle, 1 (3). pp. 210-219. [Journal article]

Morocz, M, Kalman, J, Juhasz, A, Sinko, I, McGlynn, AP, Downes, Stephen, Janka, Z and Rasko, I (2002) Elevated levels of oxidative DNA damage in lymphocytes from patients with Alzheimer's disease. NEUROBIOLOGY OF AGING, 23 (1). pp. 47-53. [Journal article]

Deming, PB, Cistulli, CA, Zhao, H, Graves, PR, Piwnica-Worms, H, Paules, RS, Downes, Stephen and Kaufmann, WK (2001) The human decatenation checkpoint. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 98 (21). pp. 12044-12049. [Journal article]

Downes, Stephen, Bachrati, CZ, Devlin, SJ, Tommasino, M, Cutts, TJR, Watson, JV, Rasko, I and Johnson, RT (2000) Mammalian S-phase checkpoint integrity is dependent on transformation status and purine deoxyribonucleosides. JOURNAL OF CELL SCIENCE, 113 (6). pp. 1089-1096. [Journal article]

Miyaji, EN, Johnson, RT, Downes, Stephen, Eveno, E, Mezzina, M, Sarasin, A and Menck, CFM (2000) Characterization of a mutant rat kangaroo cell line with alterations in the cell cycle and DNA repair. GENETICS AND MOLECULAR BIOLOGY, 23 (3). pp. 689-694. [Journal article]

Bachrati, CZ, Downes, Stephen and Rasko, I (1999) Chemical reverse transformation of CHO-K1 cells induces changes in expression of a candidate tumour suppressor and of a gene not previously characterised as transformation related. EUROPEAN JOURNAL OF CELL BIOLOGY, 78 (8). pp. 561-566. [Journal article]

Gimenez-Abian, JF, Clarke, DJ, de la Torre, C, Gimenez-Martin, G, Mullinger , AM, Downes, Stephen and Johnson, RT (1999) Competence for assembly of sister chromatid cores is progressively acquired during S phase in mammalian cells. EUROPEAN JOURNAL OF CELL BIOLOGY, 78 (8). pp. 601-603. [Journal article]

Joyce, KM, Downes, Stephen and Hannigan, BM (1999) Cell-cycle delay is induced in cells of a U937 promonocytic cell line by low-intensity light irradiation at 660 nm. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY, 52 (1-3). pp. 117-122. [Journal article]

Joyce, KM, Downes, Stephen and Hannigan, BM (1999) Radioadaptation in Indian muntjac fibroblast cells induced by low intensity laser irradiation. MUTATION RESEARCH-DNA REPAIR, 435 (1). pp. 35-42. [Journal article]

McGlynn, AP, Wasson, G, O'Connor, Jacqueline, McKerr, George, McKelvey-Martin, Valerie and Downes, Stephen (1999) The bromodeoxyuridine comet assay: Detection of maturation of recently replicated DNA in individual cells. CANCER RESEARCH, 59 (23). pp. 5912-5916. [Journal article]

Clarke, DJ, Gimenez-Abian, JF, Tonnies, H, Neitzel, E, Sperling, K, Downes, Stephen and Johnson, RT (1998) Creation of monosomic derivatives of human cultured cell lines. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 95 (1). pp. 167-171. [Journal article]

McKelvey-Martin, Valerie, Ho, ETS, McKeown, Stephanie, Johnston, SR, McCarthy, PJ, Rajab, NF and Downes, Stephen (1998) Emerging applications of the single cell gel electrophoresis (Comet) assay. I. Management of invasive transitional cell human bladder carcinoma. II. Fluorescent in situ hybridization Comets for the identification of damaged and repaired DNA sequences in individual cells. MUTAGENESIS, 13 (1). pp. 1-8. [Journal article]

Patent

University of Ulster (2010) Use of FKBPL gene to identify a cause of infertility. [Patent]

This list was generated on Wed Jul 23 08:22:52 2014 BST.